This command will perform an oligonucleotide analysis for sequences between 8 and 100 nucleotides long and send the result to the Output window.
1. Choose Analysis > Oligomer Analysis in the main menu or Sequence Analysis > Oligomer Analysis in the selection contextual menu:
or click on the Oligomer Analysis button in the Sequence toolbar:
2. Open the Output multitab window to access the information on:
• Oligonucleotide sequence
• Reverse complement sequence
• Length
• Content: Percentage of each nucleotide and GC content.
• Molecular weight
• Extension coefficient: in nmole/OD260 and µg/OD260.
• Tm: for PCR.
• GC clamps
• Complexity regions